Estimate age of single-nucleotide polymorphisms from genomes
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Updated
Jun 3, 2024 - Shell
Estimate age of single-nucleotide polymorphisms from genomes
An R package for detecting copy number variants from SNPs data
Advanced bioinformatics analysis of RNA sequencing data and genomic databases using R. Explore allelic imbalances, SNP variants, and phylogenetic trees to uncover genetic insights and visualize complex data interactions.
A tool suite for a simple, streamlined and rapid evaluation of variant callsets
The SSRG pipeline was created as a simple and focused tool to investigate genetic diversity between genomes.
An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.
Visualize microbial evolution at the SNP level!
An Efficient Swiss Army Knife for Population Genomic Analyses in R
Find causal cell-types underlying complex trait genetics
Rapidly extract a flexible bacterial core genome alignment
strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
vSNP -- validate SNPs
tools for reading, writing, merging, and remapping SNPs
GRAMEP - Genome vaRiation Analysis from the Maximum Entropy Principle
A program for pulling flanking sequences from a reference genome for a SNP
API to read, write, and filter DNA sequence alignment files
Estimating Heritability using HE regression in presence of population stratification
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