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@CERC-Genomic-Medicine

CERC Genomic Medicine

Popular repositories

  1. vep_pipeline vep_pipeline Public

    Pipeline for variant annotation using Variant Effect Predictor (VEP)

    Jupyter Notebook 4 1

  2. scripts scripts Public

    Various scripts

    Python 4 1

  3. skills_test_2 skills_test_2 Public

    4 1

  4. WEGS_pipelines WEGS_pipelines Public

    Pipelines for SNVs and InDels calling (single sample and joint) in WEGS, WGS, and WES using GATK.

    Nextflow 3

  5. skills_test_3 skills_test_3 Public

    3 1

  6. HGDP_1KG_ancestry_inference HGDP_1KG_ancestry_inference Public

    Python 3

Repositories

Showing 10 of 25 repositories
  • CARTaGENE_flagship_paper Public
    CERC-Genomic-Medicine/CARTaGENE_flagship_paper’s past year of commit activity
    Nextflow 0 GPL-3.0 0 0 0 Updated Jun 13, 2024
  • Regenie_nextflow Public

    Pipeline implementation of Regenie

    CERC-Genomic-Medicine/Regenie_nextflow’s past year of commit activity
    Nextflow 1 0 0 0 Updated Jun 5, 2024
  • vep_pipeline Public

    Pipeline for variant annotation using Variant Effect Predictor (VEP)

    CERC-Genomic-Medicine/vep_pipeline’s past year of commit activity
    Jupyter Notebook 4 1 0 0 Updated Jun 4, 2024
  • SV_calling_pipeline Public
    CERC-Genomic-Medicine/SV_calling_pipeline’s past year of commit activity
    Nextflow 1 GPL-3.0 0 0 0 Updated May 17, 2024
  • Phenotype_Filtering_Tool Public
    CERC-Genomic-Medicine/Phenotype_Filtering_Tool’s past year of commit activity
    Python 0 1 1 0 Updated May 14, 2024
  • WEGS_pipelines Public

    Pipelines for SNVs and InDels calling (single sample and joint) in WEGS, WGS, and WES using GATK.

    CERC-Genomic-Medicine/WEGS_pipelines’s past year of commit activity
    Nextflow 3 MIT 0 0 0 Updated Apr 25, 2024
  • verifybam_pipeline Public
    CERC-Genomic-Medicine/verifybam_pipeline’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Apr 20, 2024
  • CARTaGENE_PheWeb Public Forked from statgen/pheweb

    A tool to build a website to browse hundreds or thousands of GWAS.

    CERC-Genomic-Medicine/CARTaGENE_PheWeb’s past year of commit activity
    Python 0 MIT 65 0 0 Updated Apr 2, 2024
  • HGDP_1KG_ancestry_inference Public
    CERC-Genomic-Medicine/HGDP_1KG_ancestry_inference’s past year of commit activity
    Python 3 0 0 0 Updated Mar 27, 2024
  • scripts Public

    Various scripts

    CERC-Genomic-Medicine/scripts’s past year of commit activity
    Python 4 1 0 0 Updated Mar 27, 2024
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