esohkevin / gwas-tips Star 13 Code Issues Pull requests tips and tricks in genome-wide association studies - a tutorial gwas thesis plink admixture vcftools genotype-data gwas-dataset gwas-pipeline snptest gwas-tools impute2 qctool shapeit2 chromopainter finestructure Updated Jul 25, 2023
hernanmd / BioScripts Sponsor Star 2 Code Issues Pull requests A collection of miscellaneous bioinformatics scripts bash bioinformatics illumina cnv affymetrix shapeit2 Updated Feb 28, 2020 Smalltalk
rootstrap / ImputationGeneris Star 1 Code Issues Pull requests DNA Imputation tool for Generis. bioinformatics r snps genetics sequencing plink dna imputation plumber shapeit2 Updated Aug 8, 2019 R
tanoramb / Ancestry Star 0 Code Issues Pull requests Pipeline to calculate local ancestries using RFMix 1.5 or RFMix 2.0 and Beagle5 or ShapeIT gwas ancestry beagle shapeit2 ancestry-inference ancestry-estimation rfmix Updated Jun 14, 2023 Shell
jamonterotena / shapeit_reformat Star 0 Code Issues Pull requests The bash script reformats SHAPEIT .haps file to show samples by rows instead of variants by rows bioinformatics haplotypes pedigree shapeit2 Updated Mar 21, 2022 Shell