nf-core / funcscan Star 58 Code Issues Pull requests (Meta-)genome screening for functional and natural product gene sequences workflow bioinformatics pipeline nextflow amp assembly function metagenomics amr screening antimicrobial-peptides secondary-metabolites antibiotic-resistance contigs bgc arg natural-products antimicrobial-resistance-genes nf-core biosynthetic-gene-clusters Updated Jun 4, 2024 Nextflow
zellerlab / GECCO Star 52 Code Issues Pull requests GEne Cluster prediction with COnditional random fields. python bioinformatics genomics metagenomics secondary-metabolites natural-products biosynthetic-gene-clusters Updated May 8, 2024 Python
jorgecnavarrom / BGClib Star 5 Code Issues Pull requests Methods and classes to support Biosynthetic Gene Cluster analysis bioinformatics secondary-metabolites bgc biosynthetic-gene-clusters Updated Apr 17, 2024 Python
RuolinHe / SIDERITE Star 2 Code Issues Pull requests Siderophore Information Database secondary-metabolites natural-products Updated Jun 3, 2024 HTML
RuolinHe / NRPS-motif-Finder Star 1 Code Issues Pull requests NRPS motif Finder motif secondary-metabolites nrps Updated Mar 14, 2024 MATLAB
jsolorzano734 / Xylaria_necrophoraSMs Star 0 Code Issues Pull requests Repository containing data and code for analyses for the Xylaria necrophora Secondary Metabolites fungi secondary-metabolites Updated May 30, 2023 R
kblin / fungal-ui Star 0 Code Issues Pull requests A web UI for the fungal version of antiSMASH. gff3 genbank microbial-genomics microbiology fungi embl antismash secondary-metabolites genome-mining Updated Apr 9, 2019 JavaScript