Plague Global Phylogeny Manuscript
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Updated
Jun 17, 2021 - HTML
Plague Global Phylogeny Manuscript
Genomic epidemiology of novel coronavirus (SARS-CoV-2) in Pakistan
my second year poster for the Graduate School Poster Day 2016
Tracking the spread of Foot-and-Mouth Disease virus in South America
My PhD Thesis - Institute of Evolutionary Biology, University of Edinburgh, 2018
Nextstrain community build 'Molecular epidemiology of Venezuelan equine encephalitis complex viruses'
Nextstrain community build 'Molecular epidemiology of Chikungunya virus'
Example for BEAST v2.5 paper
Code repository for the longitudinal and phylodynamic analysis in "The longitudinal dynamics and natural history of clonal haematopoiesis"
Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England (peer-reviewed)
PhyloDeep is a python library for parameter estimation and model selection from phylogenetic trees, based on deep learning.
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