Fast pythontic k-mer counting routines

A parallel program that goes through a list of DNA sequences and merges those that have different in 2 or less positions (ATGC) and runs on CUDA

Comparing the effects of MDMA and Venlafaxine on Dark Agouti Rats

Repeated DNA is what makes up a large portion of a species' genome, and some of these DNA elements are able to move within the genome, we refer to them as transposons and retrotransposons. Transposons in the DNA move from one location to another by a duplicating mechanism. When it comes to cancer cells, these DNA transposons can be used to intro…

A C++ project to detect mutations on DNA sequence, comparing two DNA samples. This project was built based on a Supercomputing subject and some classic algorithms are used in this project, such as Smith Waterman, Random Local Search and Exaustive Search

Converting DNA to RNA or RNA to DNA in a fastq file

DNA barcoding analysis pipeline

Program takes in a string of DNA, and converts it to a protein chain.

Simulates and displays the optimization of a DNA sequence through natural selection, crossover, and mutation. Made in conjunction with the 2023 IGEM team at Ohio State University.

DNA sequence matcher

Molecular & Cell Biology Prototypes

Reverse engineering DNA genome using first principles.

Material used for a bioinformatics computer lab course, covering DNA/RNA sequence assembly and analysis, phylogenetic analysis, gene functional annotation, and metagenomic analysis

Utilizes Markov Models to predict protein coding genes

my solution on Rosalind

Fetch and analyze PDB files with ease! Features AT/GC content calculation, Transcription, Reverse Complement, and Translation. Built with Python 🐍.

A simple DNA transcription/translation app written in Python and kivy