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IndexError: list assignment index out of range in Mapper.py #46
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Thanks @bernard-kim for reporting this. It would be much easier to find the issue if you could share part of the data with us. This is my email address sina.majidian at gmail. The accession id would be enough if it is a public dataset. Please also tell us which clade you used to generate the marker genes or share with us the gene marker folder. Thanks! |
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It looks like something weird is happening with
Mapper.py
. I'm running read2tree through conda with Python=3.10.8, following the installation instructions in the documentation.I think
if bases
in line 513 is not properly checking empty lists, or something funky is happening - this occurs for some datasets and not others.Resulting in the error message:
The text was updated successfully, but these errors were encountered: