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@x-atlas-consortia

Atlas Consortia

A place for consortia who produce biologic data organized into atlases to share software resources.

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  1. ubkg-neo4j ubkg-neo4j Public

    A container implementation to serve the Unified Biomedical Knowledge Graph in Neo4j

    Shell 1

  2. ubkg-etl ubkg-etl Public

    A framework that combines data from the UMLS with assertions from other data sources into a set of CSV files that can be imported into neo4j to build a Unified Biomedical Knowledge Graph (UBKG)

    Python 2

  3. data-ingest-board data-ingest-board Public

    The UI App for HuBMAP and Sennet Data Publishing Dashboard

    JavaScript

  4. hra-api hra-api Public

    HRA-API: Human Reference Atlas API

    JavaScript

  5. hra-pop hra-pop Public

    HRApop

    JavaScript 1

  6. hs-ontology-api hs-ontology-api Public

    Ontology API built on top of the UBKG API and shared by HuBMAP and SenNet projects

    Python

Repositories

Showing 10 of 23 repositories
  • data-ingest-board Public

    The UI App for HuBMAP and Sennet Data Publishing Dashboard

    x-atlas-consortia/data-ingest-board’s past year of commit activity
    JavaScript 0 MIT 0 16 1 Updated Jun 26, 2024
  • hra-api Public

    HRA-API: Human Reference Atlas API

    x-atlas-consortia/hra-api’s past year of commit activity
    JavaScript 0 MIT 0 3 1 Updated Jun 26, 2024
  • hra-pop Public

    HRApop

    x-atlas-consortia/hra-pop’s past year of commit activity
    JavaScript 0 MIT 1 29 0 Updated Jun 25, 2024
  • hra-dashboard-data Public

    Gathers data for the HRA Dashboard

    x-atlas-consortia/hra-dashboard-data’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jun 21, 2024
  • hra-apps Public

    hra-apps: Applications using the Human Reference Atlas website

    x-atlas-consortia/hra-apps’s past year of commit activity
    HTML 0 MIT 0 7 0 Updated Jun 21, 2024
  • ubkg-docs Public

    Unified Biomedical Knowledge Graph (UBKG) Documentation

    x-atlas-consortia/ubkg-docs’s past year of commit activity
    JavaScript 2 MIT 1 0 0 Updated Jun 20, 2024
  • ubkg-etl Public

    A framework that combines data from the UMLS with assertions from other data sources into a set of CSV files that can be imported into neo4j to build a Unified Biomedical Knowledge Graph (UBKG)

    x-atlas-consortia/ubkg-etl’s past year of commit activity
    Python 2 MIT 0 10 0 Updated Jun 17, 2024
  • data-submission-guide Public

    A documentation site for the Data Submission Guide used by both HuBMAP and SenNet

    x-atlas-consortia/data-submission-guide’s past year of commit activity
    1 0 3 1 Updated Jun 15, 2024
  • clt Public

    The X Atlas Consortia Command Line Transfer application

    x-atlas-consortia/clt’s past year of commit activity
    Python 0 0 2 0 Updated Jun 13, 2024
  • hra-ubkg-exporter Public

    A CLI for exporting a subset of the HRA Knowledge Graph to UBKG format

    x-atlas-consortia/hra-ubkg-exporter’s past year of commit activity
    JavaScript 0 MIT 0 0 0 Updated Jun 13, 2024
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