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@vazirilab

Vaziri Lab at Rockefeller University

Neurotechnology and Biophysics

Pinned

  1. MAxiMuM_processing_tools MAxiMuM_processing_tools Public

    Pipeline based on NoRMCorre and CaImAn for segmenting large FOV, volumetric Light Bead Microscopy data.

    MATLAB 2 1

  2. MesoLF MesoLF Public

    Mesoscale volumetric light-field (MesoLF) imaging

    MATLAB 4 1

  3. SID SID Public

    Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)

    MATLAB 27 7

  4. Treadmill_control Treadmill_control Public

    Scripts for controlling treadmill and stimuli delivery.

    Python 1

Repositories

Showing 10 of 13 repositories
  • MesoLF Public

    Mesoscale volumetric light-field (MesoLF) imaging

    vazirilab/MesoLF’s past year of commit activity
    MATLAB 4 1 1 1 Updated May 20, 2024
  • scaling_analysis Public

    Analysis of the dimensionality of neuronal population dynamics as a function of neuron number

    vazirilab/scaling_analysis’s past year of commit activity
    Jupyter Notebook 3 GPL-3.0 0 0 0 Updated Mar 8, 2024
  • vaziri_dandi Public
    vazirilab/vaziri_dandi’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 21, 2024
  • PyBeamProfiler Public

    A laser beam profiler app for FLIR cameras

    vazirilab/PyBeamProfiler’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 25, 2023
  • MAxiMuM_processing_tools Public

    Pipeline based on NoRMCorre and CaImAn for segmenting large FOV, volumetric Light Bead Microscopy data.

    vazirilab/MAxiMuM_processing_tools’s past year of commit activity
    MATLAB 2 1 0 1 Updated Mar 18, 2023
  • Treadmill_control Public

    Scripts for controlling treadmill and stimuli delivery.

    vazirilab/Treadmill_control’s past year of commit activity
    Python 1 0 0 0 Updated May 25, 2021
  • stytra Public Forked from portugueslab/stytra

    A modular package to control stimulation and track behaviour

    vazirilab/stytra’s past year of commit activity
    Python 0 GPL-3.0 27 0 0 Updated Jun 26, 2020
  • neurolabware_scanbox_utils_docs Public

    Collected code, issues and wisdom on the Neurolabware Mesoscope and ScanBox software

    vazirilab/neurolabware_scanbox_utils_docs’s past year of commit activity
    MATLAB 0 MIT 0 0 0 Updated Jun 25, 2020
  • SID Public

    Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)

    vazirilab/SID’s past year of commit activity
    MATLAB 27 7 2 0 Updated Feb 26, 2020
  • CaImAn Public Forked from flatironinstitute/CaImAn

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    vazirilab/CaImAn’s past year of commit activity
    Jupyter Notebook 1 GPL-2.0 361 0 0 Updated Feb 20, 2018
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