Application of VMD in NLP via TF-IDF for better semantic relationships.
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Updated
Jan 27, 2022 - Jupyter Notebook
Application of VMD in NLP via TF-IDF for better semantic relationships.
Variational Mode Decomposition in Rust.
Config file generator for easier simulations with the Nanoscale Molecular Dynamics (NAMD) software.
Rendering 3D-Rashba-Pockets with the help of Julia and VMD
Generate Carbon Nano-Cones using VMD
A script to convert multiple pdb files to a single xyz file using VMD
Octane in a water box under CHARMM36 forcefield
VMD plug-in for building a peptide ab initio from backbone torsion angles or secondary structure
command-line interface configuration files
This project consists of multiple tcl modules, which perform a few tasks on a given protein pdb file (NMR structure)
vmdAssist is a VMD extension with tools that help us edit or create new structures like nanotube and nanotorus.
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