UNDER CONSTRUCTION: CRISPR sgRNA quantification pipeline
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Updated
Sep 27, 2019 - Nextflow
UNDER CONSTRUCTION: CRISPR sgRNA quantification pipeline
CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.
A software tool for personalized and allele-specific CRISPR editing.
Pre-trained models for the crisprScore package
Bowtie-based alignment of CRISPR gRNA spacer sequences
BWA-based alignment of CRISPR gRNA spacer sequences
Useful human and mouse data for the crisprVerse ecosystem
predicting sgRNA mismatch activity using keras
Script used to cdesign sgRNA sequences based on desired input parameters comparing different web-based tools
A flexible and fast sgRNA counter from FASTQ Files
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
Visualization of CRISPR guide RNAs (gRNAs)
Comprehensive design of CRISPR gRNAs for nucleases and base editors
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