A DSL for data-driven computational pipelines
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Updated
Jun 3, 2024 - Groovy
A DSL for data-driven computational pipelines
a pytorch lib with state-of-the-art architectures, pretrained models and real-time updated results
Tools for computation on batch systems
EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource
qtop (pronounced queue-top) is a tool written in order to monitor the state of Queueing Systems, along with related information relevant on HPC & grid clusters. At present it supports **PBS, SGE & OAR** families. There is a historic reference for the prior shell version of the tool, at former CERN source:
🚀 R package future.batchtools: A Future API for Parallel and Distributed Processing using batchtools
An information-theoretic pipeline for methylation analysis of WGBS data
IBM LSF manual translation and practical experience
Module to create DAG Task and Manage Task on SGE
An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵
Utilities to support interacting with multiple HPC clusters
Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run locally but allows simulations to be sent to powerful machines.
A workshop: using High Performance Computing at the University of Canterbury
runjob is a program for managing a group of related jobs running on a compute cluster
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