scrna-seq-analysis
Here are 124 public repositories matching this topic...
R Scripts used in scRNA-seq analysis of T2D Islets
-
Updated
Dec 11, 2020
Single-Cell Topological Simplicial Analysis (scTSA)
-
Updated
Nov 7, 2022 - Jupyter Notebook
Reproducible code for the scRNA-seq analyses in the paper 'The neuroendocrine response to stress at single-cell resolution" by Lopez et al. 2020.
-
Updated
Sep 29, 2020 - Jupyter Notebook
An autoencoder based imputation of the sparse single cell RNA-seq data.
-
Updated
Apr 6, 2019 - Python
Large-scale Benchmarking of Single-cell Differential Expression Analysis Methods
-
Updated
Nov 11, 2021 - R
Finding and analyzing alternate poly-A sites in 3' scRNA-seq 10X files
-
Updated
Apr 1, 2021 - Python
add any phylogenetically based transcriptome evolutionary index (TEI) to single-cell data objects
-
Updated
Apr 4, 2023 - HTML
Scripts from my Master's Dissertation on the UoE supercluster. Work in progress
-
Updated
Oct 6, 2023 - Shell
Simultaneous analysis of genes and transposable elements (TEs) from 10X scRNAseq datasets derived from CD and NIBD samples using Alevin.
-
Updated
Aug 16, 2021 - R
A comprehensive source for Stathopoulos lab code generated and used in data analysis.
-
Updated
Feb 23, 2023 - Shell
🧫 Comparison between COTAN and state of the art libraries for the analysis of scRNA-seq data.
-
Updated
Dec 7, 2023 - Jupyter Notebook
Integration analysis with Scanpy and scRNAseq TME from blueprint
-
Updated
Oct 12, 2023 - Jupyter Notebook
Repository to store and share all related code for the Uterine macrophages and NK cells Project from the Scott Gordon Laboratory at the Children's Hospital of Philadelphia
-
Updated
Feb 29, 2024 - R
scRNA cluster via Seurat package
-
Updated
Sep 15, 2023 - R
R package to assign an initial bone-related cell type
-
Updated
Oct 3, 2023 - R
Gene expression on C. elegans single cells
-
Updated
Jun 3, 2021 - HTML
Gene set enrichment analysis from scRNA seq data : in search of the original tissue
-
Updated
Apr 19, 2022 - R
Hierarchical and high-resolution cell-type identification for single-cell RNA-seq data based on ScType.
-
Updated
Oct 11, 2023 - R
The R script and relative data set for Integrated single-cell transcriptomics and proteomics reveal cellular-specific response and microenvironment remodeling in aristolochic acid nephropathy
-
Updated
Oct 27, 2021 - R
Improve this page
Add a description, image, and links to the scrna-seq-analysis topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the scrna-seq-analysis topic, visit your repo's landing page and select "manage topics."