Slides and files for a talk I gave at NUS on 2012-08-30
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Updated
Sep 1, 2012
Slides and files for a talk I gave at NUS on 2012-08-30
Reduce complexity of parent mass lists by e.g. filtering out unlikely peptide charge states.
Interactive BigData Application for Proteomics data.
Scoring functions to compare MS/MS spectra
A Watcher whose task is to watch a directory and once a change detected, launch a Comet-indexer job in kubernetes using Job API
Portable Proteomics Pipeline
Complementary Finder and MSn deconvolution processing nodes for Thermo Proteome Discoverer 2.x.
Kinase Activity Predictions from shotgun proteomics
Quantification and statistical analysis of quantitative proteomics experiments.
Data converter from a tab-separated text file to a QuiXML file to be used in QuiXoT.
Program used in combination with mgfToBinStack to import data from Mascot to be used in QuiXoT by converting Mascot's DAT files into QuiXML files.
Software used in combination with MascotToQuiXML to import spectral data from Mascot's MGF files to be used in QuiXoT by converting them into binStack binary files.
A software part of the QuiXoT software package used to analyse protein quantifications performed in the MS1-spectra (such as 18O/16O or SILAC).
A software for importing spectral data from Thermo RAW files to binStack format usable by QuiXoT.
A lightweight multi-purpose program to operate with XML files. Designed especially to manage large QuiXML files.
🐳 Docker Image for PaintOmics 3
Lab website, Johns Hopkins University, Betenbaugh Lab
Toolset to make proteomics data analysis less tedious.
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