Data ingest application for Monarch Initiative knowledge graph using Koza
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Updated
Jun 13, 2024 - Python
Data ingest application for Monarch Initiative knowledge graph using Koza
An ontology of cell types
Ontology for the description of human clinical features
LLM-based ontological extraction tools, including SPIRES
Mondo Disease Ontology
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
A framework for empirical evaluation of phenotype matching and prioritisation
Ontology Access Kit: A python library and command line application for working with ontologies
source files for OBA (Ontology of Biological Attributes)
Schema and generated objects for biolink data model and upper ontology
LLM-driven curation assist tool (pre-alpha)
Medical action ontology
Data transformation framework for LinkML data models
Repository for the GA4GH phenopacket schema
Automated drug repurposing workflow for rare diseases – using Flask, Monarch API, DGIdb API and XGboost.
A Tool to Annotate and Prioritize Exome Variants
A format for language profiles for ontologies
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