strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
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Updated
May 14, 2024 - HTML
strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
Ensembl VEP plugin that generates HGVS notation for Short Tandem Repeats (STR)
A macOS application for microsatellite genotyping using capillary sequencing data.
De novo repeat inference from long reads
Computational, High-throughput Individual Identification through Microsatellite Profiling
This repository contains all input files and analyses for the article "No effects of fishery collapse on the genetic diversity of the Gulf of California Corvina, Cynoscion othonopterus (Perciformes: Sciaenidae)"
An Open Source Program that allows users to interact with a Spacecraft in a lab environment, pre-launch.
Microsatellite genotyping
Looper is an ultrafast DNA tandem repeat identification tool which works on basic arithmetic rules.
Supporting code for the microsatellite genotyping paper introducing CHIIMP
Python code to convert STR length data to number of repetitions
Population genetics using microsatellites for different salmonid species
Dockerized lobSTR: a short tandem repeat profiler for next generation sequencing data
Dockerized BEASTvntr : a package for BEAST2 implementing phylogenetic analysis for VNTR or Microsatellites
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