Microsatellite genotyping
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Updated
Nov 16, 2021 - Python
Microsatellite genotyping
Dockerized BEASTvntr : a package for BEAST2 implementing phylogenetic analysis for VNTR or Microsatellites
Looper is an ultrafast DNA tandem repeat identification tool which works on basic arithmetic rules.
This repository contains all input files and analyses for the article "No effects of fishery collapse on the genetic diversity of the Gulf of California Corvina, Cynoscion othonopterus (Perciformes: Sciaenidae)"
Python code to convert STR length data to number of repetitions
De novo repeat inference from long reads
Ensembl VEP plugin that generates HGVS notation for Short Tandem Repeats (STR)
Dockerized lobSTR: a short tandem repeat profiler for next generation sequencing data
A macOS application for microsatellite genotyping using capillary sequencing data.
Supporting code for the microsatellite genotyping paper introducing CHIIMP
Computational, High-throughput Individual Identification through Microsatellite Profiling
Population genetics using microsatellites for different salmonid species
An Open Source Program that allows users to interact with a Spacecraft in a lab environment, pre-launch.
strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
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