MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification
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Updated
May 22, 2024 - Python
MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification
Advanced Normalization Tools (ANTs)
Motion correction, explicit spatio-temporal regularization of motion tracking, random speckles enhancement, and segmentation.
A Cross-Platform Multi-Language library for Moon Location Detection & Moon Image Registration.
TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.
Non-rigid image registration for accelerated MR imaging
Multi-modal Image Registration And Connectivity anaLysis
A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
Implementation of XFeat (CVPR 2024). Do you need robust and fast local feature extraction? You are in the right place!
Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
image registration related books, papers, videos, and toolboxes
Semi-random funky stuff, mainly for my PhD experiments and articles. Contains calculations and algorithm implementations for various applied mathematics and astrophysics articles I worked on.
DeeperHistReg - Source Code
From Registration Uncertainty to Segmentation Uncertainty (ISBI 2024)
selected code for 3D-2D image registration using deep learning
A python library for image stitching with distortion correction
A library for performing image registration using deep learning, regularized by inverse consistency
[Pre-print] On-the-Fly Guidance Training for Medical Image Registration. Pre-print available in link below.
[CVPR2024 Oral] CorrMLP: Correlation-aware MLP-based networks for deformable medical image registration
[ISBI 2024] SegReg: Segmenting OARs by Registering MR Images and CT Annotations
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