Base code for NeuroIPS 2023 paper on NMDA activation function on transformers

Scripts for reproducing the figures of Hippocampal-Prefrontal Interactions during Spatial Decision-Making, Tavares & Tort 2020.

hippocampus volume quantification

[Software for Master's thesis] ∘ Real-time signal detection for closed-loop, in-vivo neuroscience

Full-scale biophysical model of the dentate gyrus

Hippocampal segmentation using the UNet network for each axis, inspired by https://github.com/MICLab-Unicamp/e2dhipseg

Scripts for reproducing the figures of Hippocampal-Prefrontal Interactions during Spatial Decision-Making, Tavares & Tort 2020.

Code for my paper: "Theta sequences as eligibility traces: a biological solution to credit assignment"

The final project of "Applying AI to 3D Medical Imaging Data" from "AI for Healthcare" nanodegree - Udacity.

An open-source package that offer fully-functional spike-based bio-inspired hippocampal memory models implemented with SNN technology in the SpiNNaker hardware in Python

Simulations concerning the Hippocampal CA3 network

SynapticVes-Py. Python code to support 3D quantitative analysis of presynaptic active zones in hippocampal mossy fiber boutons using electron tomograms and IMOD model output.

Spatial memory in health and disease: Hippocampal stability deficits in the Df(16)A+/- mouse model of schizophrenia

ScanHippoHealth: MRI segmentation using 3D-Unet on Medical Segmentation Decathlon data. Flask app with secure authentication, predicting and displaying six slices of input MRI alongside masks for precise hippocampus segmentation. Contributions welcome to enhance medical image analysis for better diagnostics.

This small graphical user interface helps to map the anatomical borders of dentate gyrus in an imaged volume onto morphologies that had been reconstructed in that volume.

Hippocampus simulation

Hippocampus Memory Feature Simulation

The LCN-HippoModel is a biophysically realistic model of CA1 pyramidal cells aimed to get novel insights on firing dynamics in deep and superficial populations during the theta rhythm.