This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/ChIPsim.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=ChIPsim.
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Updated
Oct 16, 2015 - R
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/ChIPsim.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=ChIPsim.
geneSpark is a bioinformatics software program written in Python and Apache Spark for big data epigenetic histone modification ChIP-seq analysis.
ChIP-seq pipeline (Nextflow)
This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DiffBind.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=DiffBind. User Guide: http://bioconductor.org/packages/release/bioc/vignettes/DiffBind/inst/doc/DiffBind.pdf
NGSハンズオン講習会2016年 NGS解析基礎、RNA-seq、Reseq、ChIP-seq資料
MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets
An archived version of the csaw repository, see https://github.com/LTLA/csaw for the active version.
Predicting Transcription Factor Binding Sites from ENCODE data using Machine Learning
R package to provide gene transfer format files from commonly investigated model organisms in ChIP-seq studies
An archived version of the chipseqDB repository, see https://github.com/LTLA/chipseqDB for the active version.
optimized protocol for processing 50-bp SE ChIP-seq
ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps
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