A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
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Updated
Apr 1, 2022 - Python
A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
Keras implementation of the paper "3D MRI brain tumor segmentation using autoencoder regularization" by Myronenko A. (https://arxiv.org/abs/1810.11654).
The purpose of this project is to be able to automatically and efficiently segment and classify high-grade and low-grade gliomas.
This is a complete guide on how to do Pyradiomics based feature extraction and then, build a model to calculate the grade of glioma.
Semantic segmentation for brain tumors
We segmented the Brain tumor using Brats dataset and as we know it is in 3D format we used the slicing method in which we slice the images in 2D form according to its 3 axis and then giving the model for training then combining waits to segment brain tumor. We used UNET model for our segmentation.
In this work we present a task-agnostic Multimodal Variational Aversarial Active Learning (M-VAAL) for sampling the most informative samples for annotation in various Medical Image Analysis Downstream tasks, such as segmentation, and classification.
We provide a method to extract the tractographic features from structural MR images for patients with brain tumor
Implementation of different techniques for segmentation of tumors in MRI images.
We segmented the Brain tumor using Brats dataset and as we know it is in 3D format we used the slicing method in which we slice the images in 2D form according to its 3 axis and then giving the model for training then combining waits to segment brain tumor. We used UNET model for training our dataset.
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