A general 16S rDNA sequencing analysis pipeline
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Updated
Jul 6, 2022 - Python
A general 16S rDNA sequencing analysis pipeline
Fast and Accurate Approach of Structural Variations Detection for Short DNA fragments
A workflow automation script: demultiplex the library sequence, run quality checks, deliver to archiving and processing afterwards
A kernel-based distance calculator for protein sequences.
Build highly accurate transcripts from long-read RNA data
An implementation of modified K-Means clustering on Biological Data (Proteins).
Builds lists of Taxonomy Identifiers based on the NCBI Taxonomy Database
The Peaks software GitHub repository
Visualization tool to plot composites at genomic loci, reference points & regions of interest
A containerized nextflow pipeline designed to annotate prokaryote genomes.
Translation tool: process DNA or RNA to protein by your customized genetic code table
Lightweight standalone tool to reduce size of VCF files through filtering
An application to find and visualize circadian rhythms in time course data using extended harmonic oscillators.
生信常用工具合集,包括gtf/fastx/bam/bed格式文件的处理和转换,bam,bed注释工具,R绘图脚本等。
Ribo-seq focused Oligo Design pipeline for experiment-specific Depletion of Ribosomal RNAs
A novel bioinformatics tool in Java to build phased long alleles of STR+SNP+InDel from VCF file
Sequence Alignment tool
A pipeline for quick and dirty QC of your small RNA-seq libraries focused on piRNA.
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