A collection of Dockerfiles and Singularity definition files used to build the containers that are used on the Roar cluster!
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Updated
Apr 27, 2022 - Dockerfile
A collection of Dockerfiles and Singularity definition files used to build the containers that are used on the Roar cluster!
A short tutorial on building an Apptainer image for fast.ai course/book
A collections of portable, real-world AI workflows for testing and benchmarking
A repository for showcasing my knowledge of the Singularity programming language, and continuing to learn the language.
The Singularity Programming language IDE submodule for SNU Programming Tools (2D Mode)
Examples on leveraging SLURM+Singularity+CUDA. Mirror of https://github.com/bencardoen/singularity_slurm_cuda
Example on how to leverage Singularity on HPC. Mirror of https://github.com/bencardoen/singularity_slurm_cuda
Part of this project is apptainer recipe file formalizing build of CoLoRe as a containerized application.
Provides syntax highlighting for Apptainer/Singularity definition files.
Build Docker container for Apptainer/Singularity software
Build Docker container for FastQC software and (optionally) convert to Apptainer/Singularity.
Build Docker container for HTSeq and (optionally) convert to Apptainer/Singularity
Build Docker container for FastQ Screen software and (optionally) convert to Apptainer/Singularity.
Build Docker container for BBTools and (optionally) convert to Apptainer/Singularity.
Build Docker container for ea-utils and (optionally) convert to Apptainer/Singularity.
Build Docker container for HISAT2 and (optionally) convert to Apptainer/Singularity.
Build Docker container for MultiQC and (optionally) convert to Apptainer/Singularity.
Build Docker container for Picard Tools and (optionally) convert to Apptainer/Singularity.
Add a description, image, and links to the apptainer topic page so that developers can more easily learn about it.
To associate your repository with the apptainer topic, visit your repo's landing page and select "manage topics."