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Peak calling optimization via real time results assessment and interactive parameter adjustment.

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stjude-biohackathon/peakPeekeR

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peakPeekeR

Installation

devtools::install_github("stjude-biohackathon/peakPeakeR")

Test

This will install the peak caller environments the first time run and print their versions (SICER2 doesn't have a version command). It will take several minutes to run the first time, but will be very quick thereafter, as the environments are retained.

library("peakPeekeR")
test()