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Bump package version and update description
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slipnitskaya committed Jul 24, 2023
1 parent 5bb67f8 commit 327ac21
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2 changes: 1 addition & 1 deletion regulAS/__init__.py
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__author__ = 'Sofya Lipnitskaya'
__version__ = '2023.07'
__version__ = '2023.07.1'

from .core import RegulAS
from .persistence import *
19 changes: 6 additions & 13 deletions setup.py
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import regulAS

from pathlib import Path
from setuptools import setup

this_directory = Path(__file__).parent
long_description = (this_directory / "README.md").read_text()

setup(
name='regulAS',
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url='https://github.com/slipnitskaya/regulAS',
author='Sofya Lipnitskaya',
author_email='[email protected]',
description='regulAS is a bioinformatics package designed to assist researchers in identifying prospective '
'regulators of alternative splicing events using large-scale RNA-Seq datasets from multiple omics '
'data sources. Its core functionality offers automation of data processing, machine learning '
'experiments, as well as efficient storage and processing of obtained results. '
'With basic modules that integrate data retrieval of tumor and healthy samples generated by '
'TCGA (https://www.cancer.gov/tcga) and GTEx (https://gtexportal.org/home) projects, predictive '
'modelling and feature ranking capabilities, along with flexible report generation in tabular and '
'visual forms, regulAS provides a comprehensive suite of tools for streamlined data exploration and '
'research workflows. Additionally, regulAS supports flexible experiment configuration through YAML '
'files, allowing users to easily adapt the package to their specific needs. One of the standout '
'feature of regulAS is its extensibility, enabling end-users to expand its functionality by writing '
'custom modules in Python. Discover the versatility of regulAS for your computational biology and '
'bioinformatics research.',
description='Bioinformatics Tool for the Integrative Analysis of Alternative Splicing Regulome using RNA-Seq data',
long_description=long_description,
long_description_content_type='text/markdown',
python_requires='>=3.7',
install_requires=[
'networkx==2.5',
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