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Issues list

multiprocessing for dataloader
#590 opened Jun 18, 2024 by xiao233333
1
Invalid shapes during vectorization
#583 opened Jun 12, 2024 by quentinblampey
sdata does not save when chunks are not equal
#581 opened Jun 12, 2024 by lotte-vandevreken
set_table_annotates_spatialelement doesn't return a valid table
#580 opened Jun 12, 2024 by giovp
@melonora
Optimize writing performance for MultiscaleSpatialImage topic: IO
#577 opened Jun 11, 2024 by LucaMarconato
1
MultiScaleImage datatree.DataTree attrs in sdata object lost when writing to disk
#576 opened Jun 11, 2024 by simone-codeluppi
7
Saving large files to .zarr
#571 opened May 28, 2024 by asom
2
Querying points doesn't filter the associated table topic: points Points in space topic: query
#567 opened May 24, 2024 by LucaMarconato
1
polygon_query() with filter_table=True on labels should filter the table. topic: query
#564 opened May 23, 2024 by LucaMarconato
Test aggregation of vector data by vector data when agg_func is a list of str topic: aggregation
#561 opened May 16, 2024 by LucaMarconato
Can't save transformation result
#558 opened May 6, 2024 by Ithinky
5
Subset spatialdata by list of cell ids
#556 opened May 1, 2024 by RAC1924
1
Unknown normalization when rendering crops from spatial samples.
#553 opened Apr 29, 2024 by rushin682
2
polygon_query() throws AttributeError: 'NoneType' object has no attribute 'intersects' error
#552 opened Apr 28, 2024 by olivermccallion
Something wrong about annotating regions of interest with napari
#551 opened Apr 25, 2024 by Tony4709
1
Extract Image features from VisiumHD and Squidpy
#548 opened Apr 19, 2024 by sokratiag
2
Overlay custom shape onto cell boundaries from Xenium
#547 opened Apr 17, 2024 by EST09
2
Cannot aggregate Labels2DModel by ShapesModel
#546 opened Apr 17, 2024 by GuoshengMa
1
Feedback on concatenate()
#541 opened Apr 8, 2024 by grst
1
Parameter name (target_|to_)?coordinate_system(s)?
#534 opened Apr 3, 2024 by LucaMarconato
Mixed polygon/multipolygon geometry types from disk topic: IO topic: Shapes Shapes
#529 opened Mar 30, 2024 by LucaMarconato
Raster models validation should be a classmethod. topic: images Pictures of stuff topic: labels Regions as pixel masks
#528 opened Mar 30, 2024 by LucaMarconato
Missing dtype validation for labels? topic: labels Regions as pixel masks
#527 opened Mar 30, 2024 by LucaMarconato
_get_unique_label_values_as_index() should be included as a case of get_values()
#522 opened Mar 28, 2024 by LucaMarconato
1 task
1
Allow reloading of particular elements, and add reload: bool parameter to write functions topic: IO
#521 opened Mar 27, 2024 by LucaMarconato
4 tasks
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