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@navis-org

NAVis

Tools for Neuron Analysis & Visualization
README.md

We make tools for processing and analysing of neurobiological data.

Pinned

  1. navis navis Public

    Python library for analysis of neuroanatomical data.

    Python 80 29

  2. pymaid pymaid Public

    Python library to interface with CATMAID servers. Fully interoperable with navis.

    Python 23 12

  3. skeletor skeletor Public

    Extraction of 3D skeletons from meshes.

    Python 183 24

  4. fafbseg-py fafbseg-py Public

    Tools to work with the FlyWire connectome. Fully interoperable with navis.

    Python 12 5

  5. navis-flybrains navis-flybrains Public

    Transforms for navis that enable mapping between different Drosophila template brains.

    Jupyter Notebook 5 2

  6. fastcore fastcore Public

    [WIP] Fast core functions for navis re-implemented in Cython.

    Jupyter Notebook 1 1

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