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@marbl

MarBL

Maryland Bioinformatics Labs

Popular repositories

  1. CHM13 CHM13 Public

    The complete sequence of a human genome

    878 96

  2. canu canu Public

    A single molecule sequence assembler for genomes large and small.

    C++ 640 176

  3. Krona Krona Public

    Interactively explore metagenomes and more from a web browser.

    JavaScript 452 100

  4. Mash Mash Public

    Fast genome and metagenome distance estimation using MinHash

    C++ 378 90

  5. merqury merqury Public

    k-mer based assembly evaluation

    Shell 272 19

  6. MashMap MashMap Public

    A fast approximate aligner for long DNA sequences

    C++ 258 38

Repositories

Showing 10 of 38 repositories
  • verkko Public
    marbl/verkko’s past year of commit activity
    Python 256 27 26 1 Updated Jun 20, 2024
  • canu Public

    A single molecule sequence assembler for genomes large and small.

    marbl/canu’s past year of commit activity
    C++ 640 176 20 3 Updated Jun 20, 2024
  • meryl-utility Public

    A collection of miscellaneous code used by Meryl, Canu and others.

    marbl/meryl-utility’s past year of commit activity
    C 1 3 0 0 Updated Jun 17, 2024
  • seqrequester Public

    A tool for summarizing, extracting, generating and modifying DNA sequences.

    marbl/seqrequester’s past year of commit activity
    C 23 4 3 1 Updated Jun 15, 2024
  • ModDotPlot Public
    marbl/ModDotPlot’s past year of commit activity
    Python 97 MIT 8 3 0 Updated Jun 13, 2024
  • Winnowmap Public

    Long read / genome alignment software

    marbl/Winnowmap’s past year of commit activity
    C 228 21 25 0 Updated Jun 13, 2024
  • CHM13 Public

    The complete sequence of a human genome

    marbl/CHM13’s past year of commit activity
    878 96 21 (1 issue needs help) 0 Updated Jun 11, 2024
  • T2T-Browser Public

    Genome browser hub for the T2T genomes and resources

    marbl/T2T-Browser’s past year of commit activity
    HTML 5 0 0 0 Updated Jun 7, 2024
  • training Public

    Genome Assembly 102

    marbl/training’s past year of commit activity
    Shell 6 0 0 0 Updated Jun 5, 2024
  • HG002 Public

    A complete diploid human genome

    marbl/HG002’s past year of commit activity
    83 4 1 0 Updated May 22, 2024
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