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kreshuklab

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Popular repositories

  1. plant-seg plant-seg Public

    A tool for cell instance aware segmentation in densely packed 3D volumetric images

    Python 86 30

  2. spoco spoco Public

    PyTorch implementation of SPOCO

    Python 32 7

  3. MorphoFeatures MorphoFeatures Public

    MorphoFeatures code and data

    Python 18 1

  4. go-nuclear go-nuclear Public

    Guides and code for 3D nuclear instance segmentation

    Python 16 2

  5. hylfm-net hylfm-net Public

    Python 13 2

  6. teaching-dl-course-2019 teaching-dl-course-2019 Public

    EMBL Deep Learning course 2019 exercises and materials

    Jupyter Notebook 6 9

Repositories

Showing 10 of 36 repositories
  • bioimg_rs Public

    A rust implementation of bioimage spec parser

    kreshuklab/bioimg_rs’s past year of commit activity
    Rust 0 1 1 0 Updated Jun 17, 2024
  • plant-seg Public

    A tool for cell instance aware segmentation in densely packed 3D volumetric images

    kreshuklab/plant-seg’s past year of commit activity
    Python 86 MIT 30 33 2 Updated Jun 12, 2024
  • go-nuclear Public

    Guides and code for 3D nuclear instance segmentation

    kreshuklab/go-nuclear’s past year of commit activity
    Python 16 MIT 2 0 1 Updated May 22, 2024
  • 3D-GT-tools Public

    List of tools for creating ground truth annotations for 3D data

    kreshuklab/3D-GT-tools’s past year of commit activity
    1 0 0 0 Updated Mar 26, 2024
  • EMBL-Deep-Learning-course-2023- Public

    EMBL Deep Learning course 2023 exercises and materials

    kreshuklab/EMBL-Deep-Learning-course-2023-’s past year of commit activity
    Jupyter Notebook 5 5 0 3 Updated Feb 28, 2024
  • predoc-course Public

    Kreshuk Lab's EMBL EIPP predoc course teaching material, each branch keeps the record of a specific season

    kreshuklab/predoc-course’s past year of commit activity
    2 2 0 0 Updated Nov 2, 2023
  • .github Public

    Kreshuk Group - Machine learning for bioimage analysis

    kreshuklab/.github’s past year of commit activity
    2 0 0 0 Updated May 19, 2023
  • MorphoFeatures Public

    MorphoFeatures code and data

    kreshuklab/MorphoFeatures’s past year of commit activity
    Python 18 GPL-3.0 1 1 0 Updated May 4, 2023
  • spoco Public

    PyTorch implementation of SPOCO

    kreshuklab/spoco’s past year of commit activity
    Python 32 7 1 0 Updated Apr 8, 2023
  • kreshuklab-utils Public

    Python package for common lab code

    kreshuklab/kreshuklab-utils’s past year of commit activity
    0 MIT 0 0 0 Updated Feb 17, 2023
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