Skip to content

HRA VCCF: Human Reference Atlas - Vasculature Common Coordinate Framework

License

Notifications You must be signed in to change notification settings

hubmapconsortium/hra-vccf

Repository files navigation

Human Reference Atlas-Vasculature Common Coordinate Framework (HRA-VCCF)

Data files (.csv) are freely available under a Creative Commons Attribution 4.0 International (CC BY 4.0) license, and code files (.sql) are freely available under an MIT license.

Documentation

See Anatomical structures, cell types, and biomarkers of the healthy human blood vasculature (https://www.nature.com/articles/s41597-023-02018-0)

Notes:

  1. The BodySubPart and BodySubPartID fields in the Vessels.csv file are no longer being updated. This has been moved to the new VesselOrganCrosswalk.csv file and expanded. Please use this file for the most recent mappings.

  2. FMA IDs are now in the format "FMA:NNNNN" instead of "fmaNNNNN" to align with other Human Reference Atlas (HRA) files.

  3. The format of values in the ReferenceDOI field now algins with the new Reference ID format used in the HRA ASCT+B tables.

About

HRA VCCF: Human Reference Atlas - Vasculature Common Coordinate Framework

Topics

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages