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13 Open 21 Closed
13 Open 21 Closed
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Issues list

Support for local execution enhancement New feature or request
#34 opened Feb 19, 2020 by oskarvid Milestone 4
Explore building the Singularity image with Travis enhancement New feature or request
#33 opened Feb 19, 2020 by oskarvid Milestone 4
Figure out how gvanno can fit in to the workflow enhancement New feature or request question Further information is requested
#32 opened Feb 19, 2020 by oskarvid
Upgrade Singularity to the latest supported version on TSD enhancement New feature or request
#31 opened Feb 19, 2020 by oskarvid
Upgrade GATK to the latest version enhancement New feature or request
#30 opened Feb 19, 2020 by oskarvid
Potential issue if we officially support exome (interval file) data analysis question Further information is requested
#29 opened Feb 19, 2020 by oskarvid
Run hap.py on wgs output files
#28 opened Feb 19, 2020 by oskarvid
Add version numbers where necessary
#27 opened Feb 17, 2020 by oskarvid Milestone 3
Inform user of which sample/s failed enhancement New feature or request
#26 opened Feb 17, 2020 by oskarvid Milestone 3
Reconsider how the -e flag should function enhancement New feature or request
#25 opened Feb 11, 2020 by oskarvid Milestone 3
Remove code from the settings file enhancement New feature or request
#24 opened Feb 11, 2020 by oskarvid Milestone 3
Required parameter "-o" not detected as missing if not present. bug Something isn't working
#21 opened Jan 24, 2020 by kjellp Milestone 3
2
Move most or all command line options to the settings file enhancement New feature or request
#19 opened Jan 21, 2020 by oskarvid Milestone 3
ProTip! Adding no:label will show everything without a label.