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@JuliaLang

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Achievement: YOLOAchievement: QuickdrawAchievement: Public SponsorAchievement: Pull Sharkx2Achievement: StarstruckAchievement: Arctic Code Vault Contributor
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Achievements

Achievement: YOLOAchievement: QuickdrawAchievement: Public SponsorAchievement: Pull Sharkx2Achievement: StarstruckAchievement: Arctic Code Vault Contributor
BetaSend feedback

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@rcmd @MolBIFFM @eckerlab
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dfsp-spirit/README.md

Hi, I'm Tim Schäfer. I am a bioinformatician and currently a Research Software Engineer in the department of Biodiversity Informatics at Senckenberg Society for Nature Research.

  • 🚀 I enjoy using tools like Python, Julia, C++, Docker and R to solve scientific problems, build high quality scientific software and services, and promote open science and open research data.
  • 🌱 I’m currently working on open linked data, FAIR digital objects, and sustainable research data management at Senckenberg. We use an internal GitLab instance, so my activity here on GitHub will decline a bit, but I still have an eye on the software I maintain.

I get a ton of Github notifications and things do slip through once in a while, so if you want to contact me on something unrelated to my software projects, please write me an email.

Pinned

  1. vplg vplg Public

    The Visualization of Protein-Ligand Graphs software that powers the PTGL webserver at http://ptgl.uni-frankfurt.de/. One of my PhD projects.

    JavaScript 6 3

  2. freesurferformats freesurferformats Public

    GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.

    R 23 3

  3. fsbrain fsbrain Public

    R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.

    R 60 12

  4. NeuroFormats.jl NeuroFormats.jl Public

    Handling of structural neuroimaging file formats for Julia.

    Julia 11 1

  5. neuroformats-rs neuroformats-rs Public

    Handling of structural neuroimaging file formats for Rust.

    Rust 6 1

  6. haze haze Public

    Fast smoothing of per-vertex data on triangular meshes for R.

    R 5