Simulation and inference of networks of gene regulation with Protein Kinase, Transcription Factor and gene elements. Most functions can be called through simulation.jl and inference.jl.
- Julia. Currently on 1.7.1. Problems testing on 1.7.2.
- Run
./install.shwhich sets commandgit root - Either run
./install.jlor./install_instantiate.jlwhich installs Julia dependencies as newest versions or as tested versions, respectively. - Auto-detect environment at startup by adding
startup.jlto~/.julia/config/startup.jl, e.g. by runningcat startup.jl >> ~/.julia/config/startup.jl