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viennarna 2.6.3

viennarna 2.6.3 #1685

Triggered via pull request September 16, 2023 01:05
Status Failure
Total duration 23m 27s
Artifacts 1

build-bottles.yml

on: pull_request
Matrix: build-bottles
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2 errors and 3 warnings
`brew install --verbose --build-bottle brewsci/bio/viennarna` failed on Linux!: Formula/viennarna.rb#L28
Making install in Example make[2]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold/Example' make[3]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold/Example' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold/Example' make[2]: Leaving directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold/Example' make[2]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold' CC baum.o CC cache.o CC globals.o CC main.o CC nachbar.o CC cmdline.o CCLD Kinfold make[3]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold' /usr/bin/mkdir -p '/home/linuxbrew/.linuxbrew/Cellar/viennarna/2.6.3/share/man/man1' /usr/bin/mkdir -p '/home/linuxbrew/.linuxbrew/Cellar/viennarna/2.6.3/bin' /usr/bin/install -c Kinfold '/home/linuxbrew/.linuxbrew/Cellar/viennarna/2.6.3/bin' /usr/bin/install -c -m 644 Kinfold.1 '/home/linuxbrew/.linuxbrew/Cellar/viennarna/2.6.3/share/man/man1' make[3]: Leaving directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold' make[2]: Leaving directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold' make[1]: Leaving directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold' Making install in src/RNAforester make[1]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/RNAforester' Making install in g2-0.72 make[2]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/RNAforester/g2-0.72' gcc-11 -I./src -g -O2 -I/usr/local/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DLINUX=1 -DDO_PS=1 -DDO_FIG=1 -DDO_X11=1 -DDO_XDBE=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -c src/g2_device.c -o src/g2_device.o gcc-11 -I./src -g -O2 -I/usr/local/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DLINUX=1 -DDO_PS=1 -DDO_FIG=1 -DDO_X11=1 -DDO_XDBE=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -c src/g2_ui_control.c -o src/g2_ui_control.o gcc-11 -I./src -g -O2 -I/usr/local/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DLINUX=1 -DDO_PS=1 -DDO_FIG=1 -DDO_X11=1 -DDO_XDBE=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -c src/g2_util.c -o src/g2_util.o gcc-11 -I./src -g -O2 -I/usr/local/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DLINUX=1 -DDO_PS=1 -DDO_FIG=1 -DDO_X11=1 -DDO_XDBE=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -c src/g2_fif.c -o src/g2_fif.o gcc-11 -I./src -g -O2 -I/usr/local/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DLINUX=1 -DDO_PS=1 -DDO_FIG=1 -DDO_X11=1 -DDO_XDBE=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -c src
build-bottles (ubuntu-latest)
Process completed with exit code 1.
build-bottles (ubuntu-latest)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/cache@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build-bottles (ubuntu-latest)
No files were found with the provided path: *.bottle.*. No artifacts will be uploaded.
build-bottles (macos-latest)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/cache@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Artifacts

Produced during runtime
Name Size
bottles Expired
34.3 MB