viennarna 2.6.3 #1685
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2 errors and 3 warnings
`brew install --verbose --build-bottle brewsci/bio/viennarna` failed on Linux!:
Formula/viennarna.rb#L28
Making install in Example
make[2]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold/Example'
make[3]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold/Example'
make[3]: Nothing to be done for 'install-exec-am'.
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold/Example'
make[2]: Leaving directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold/Example'
make[2]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold'
CC baum.o
CC cache.o
CC globals.o
CC main.o
CC nachbar.o
CC cmdline.o
CCLD Kinfold
make[3]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold'
/usr/bin/mkdir -p '/home/linuxbrew/.linuxbrew/Cellar/viennarna/2.6.3/share/man/man1'
/usr/bin/mkdir -p '/home/linuxbrew/.linuxbrew/Cellar/viennarna/2.6.3/bin'
/usr/bin/install -c Kinfold '/home/linuxbrew/.linuxbrew/Cellar/viennarna/2.6.3/bin'
/usr/bin/install -c -m 644 Kinfold.1 '/home/linuxbrew/.linuxbrew/Cellar/viennarna/2.6.3/share/man/man1'
make[3]: Leaving directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold'
make[2]: Leaving directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold'
make[1]: Leaving directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/Kinfold'
Making install in src/RNAforester
make[1]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/RNAforester'
Making install in g2-0.72
make[2]: Entering directory '/tmp/viennarna-20230916-9678-10barkw/ViennaRNA-2.6.3/src/RNAforester/g2-0.72'
gcc-11 -I./src -g -O2 -I/usr/local/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DLINUX=1 -DDO_PS=1 -DDO_FIG=1 -DDO_X11=1 -DDO_XDBE=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -c src/g2_device.c -o src/g2_device.o
gcc-11 -I./src -g -O2 -I/usr/local/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DLINUX=1 -DDO_PS=1 -DDO_FIG=1 -DDO_X11=1 -DDO_XDBE=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -c src/g2_ui_control.c -o src/g2_ui_control.o
gcc-11 -I./src -g -O2 -I/usr/local/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DLINUX=1 -DDO_PS=1 -DDO_FIG=1 -DDO_X11=1 -DDO_XDBE=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -c src/g2_util.c -o src/g2_util.o
gcc-11 -I./src -g -O2 -I/usr/local/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DLINUX=1 -DDO_PS=1 -DDO_FIG=1 -DDO_X11=1 -DDO_XDBE=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -c src/g2_fif.c -o src/g2_fif.o
gcc-11 -I./src -g -O2 -I/usr/local/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DLINUX=1 -DDO_PS=1 -DDO_FIG=1 -DDO_X11=1 -DDO_XDBE=1 -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_LIMITS_H=1 -c src
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build-bottles (ubuntu-latest)
Process completed with exit code 1.
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build-bottles (ubuntu-latest)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/cache@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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build-bottles (ubuntu-latest)
No files were found with the provided path: *.bottle.*. No artifacts will be uploaded.
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build-bottles (macos-latest)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/cache@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Artifacts
Produced during runtime
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bottles
Expired
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34.3 MB |
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