Make tsfresh compatible with numpy 1.24 #331
Workflow file for this run
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--- | |
name: Test | |
on: | |
pull_request: | |
push: | |
branches: | |
- main | |
jobs: | |
test: | |
name: Test | |
runs-on: ubuntu-latest | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: [3.7, 3.8, 3.9] | |
installation: ["lowest", "highest"] | |
include: | |
- python-version: 3.7 | |
installation: "lowest" | |
NUMPY: "1.15.1" | |
PANDAS: "1.0.5" # see https://github.com/numpy/numpy/issues/18355 | |
SCIKITLEARN: "0.22.0" | |
DASK: "2.9.0" | |
DISTRIBUTED: "2.11.0" | |
SCIPY: "1.2.0" | |
STATSMODELS: "0.13.0" | |
- python-version: 3.8 | |
installation: "lowest" | |
# only starting from these version, there is a wheel | |
NUMPY: "1.17.3" | |
PANDAS: "1.0.5" | |
SCIKITLEARN: "0.22.0" | |
DASK: "2.9.0" | |
DISTRIBUTED: "2.11.0" | |
# 1.2.0 is not installable with python 3.8... | |
SCIPY: "1.4.0" | |
STATSMODELS: "0.13.0" | |
- python-version: 3.9 | |
installation: "lowest" | |
# only starting from these version, there is a wheel | |
NUMPY: "1.20.3" | |
PANDAS: "1.3.5" | |
SCIKITLEARN: "1.0.1" | |
DASK: "2021.12.0" | |
DISTRIBUTED: "2021.12.0" | |
SCIPY: "1.7.3" | |
STATSMODELS: "0.13.0" | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v3 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Cache pip | |
uses: actions/cache@v3 | |
with: | |
path: ~/.cache/pip | |
key: ${{ runner.os }}-pip-${{ hashFiles('requirements.txt') }}-${{ hashFiles('test-requirements.txt') }}-${{ matrix.python-version }}-${{ matrix.installation }} | |
restore-keys: | | |
${{ runner.os }}-pip-${{ hashFiles('requirements.txt') }}-${{ hashFiles('test-requirements.txt') }}-${{ matrix.python-version }}-${{ matrix.installation }} | |
- name: Install dependencies | |
run: | | |
# Do all the installations | |
python -m pip install --upgrade pip wheel setuptools | |
# Now downgrade packages if required by environment variables | |
[ -z "${{matrix.NUMPY}}" ] || pip install numpy==${{matrix.NUMPY}} | |
[ -z "${{matrix.PANDAS}}" ] || pip install pandas==${{matrix.PANDAS}} | |
[ -z "${{matrix.SCIKITLEARN}}" ] || pip install scikit-learn==${{matrix.SCIKITLEARN}} | |
[ -z "${{matrix.STATSMODELS}}" ] || pip install statsmodels==${{matrix.STATSMODELS}} | |
[ -z "${{matrix.DASK}}" ] || pip install dask==${{matrix.DASK}} | |
[ -z "${{matrix.DISTRIBUTED}}" ] || pip install distributed==${{matrix.DISTRIBUTED}} | |
# need to downgrade tornado manually | |
[ -z "${{matrix.SCIPY}}" ] || pip install scipy==${{matrix.SCIPY}} | |
pip install -r requirements.txt -r test-requirements.txt | |
pip install . | |
# Print out the pip versions for debugging | |
pip list | |
- name: Test with pytest | |
run: | | |
pytest --junitxml=junit/test-results-${{ matrix.python-version }}-${{ matrix.installation }}.xml --cov-report=xml tests | |
- name: Upload pytest test results | |
uses: actions/upload-artifact@v1 | |
with: | |
name: pytest-results-${{ matrix.python-version }}-${{ matrix.installation }} | |
path: junit/test-results-${{ matrix.python-version }}-${{ matrix.installation }}.xml | |
# Use always() to always run this step to publish test results when there are test failures | |
if: ${{ always() }} | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v3 |