Releases · biopragmatics/bioregistry

What's Changed

Add PubMed and PMC contact and update PMC information by @cthoyt in #968
Externalize prefix map export implementation by @cthoyt in #972
Refactor converter generation code by @cthoyt in #974
Reimplement CURIE prefix reconciliation for prescriptive contexts by @cthoyt in #975
Implement rewiring by @cthoyt in #977
Add NIST CODATA by @cthoyt in #980
Add DOAP to semantic web collection, remove "integration status" label, and remove bulk prefix form generation by @cthoyt in #981
Add prefix: m4i by @github-actions in #971
Update NMDC pattern and URI format by @cthoyt in #982
Update OBO in OWL by @cthoyt in #973
Add NCBIGene synonym by @cthoyt in #988
Remove unused hierarchical annotation and add additional mismatches by @cthoyt in #994
Add field for annotating unresolvable ontologies, update OLS processing, and better annotate HPATH by @cthoyt in #993
Add prefix: mvx by @github-actions in #987
Add prefix: devtox by @cthoyt in #995
Update lab and funding text by @cthoyt in #996
Add prefix: oecd.template by @github-actions in #998
Improve new prefix form by @cthoyt in #1000
Add cellguide providers for CL and UBERON by @github-actions in #1002
New prefix: openWEMI by @cthoyt in #1004
Add Bioregistry canonical prefixes as synonyms in OBO export by @cthoyt in #1005
New prefixes: cc and rdfa by @cthoyt in #1006
Update shex by @cthoyt in #1007
Add prefix: metacyc.pathway by @github-actions in #1013
Update glygen by @jeet-vora in #1015
Add Dewey Decimal Classification, AFTOL Categories, and improve BARTOC import by @cthoyt in #1017
Improve FAIRsharing import by @cthoyt in #1018
Align with Linked Open Vocabularies (LOV) by @cthoyt in #1019
Add Zazuko Prefix Registry by @cthoyt in #1020
Align with TogoID by @cthoyt in #1021
Update prefix: m4i by @Zack-83 in #1022
Add VectorBase contact by @cthoyt in #1023
Improve ORCID validation by @cthoyt in #1024
Align Integbio by @cthoyt in #1025
Align with Pathguide by @cthoyt in #1026
Add some synonyms for prefixes by @bgyori in #1027
Updates to the WikiPathways record by @egonw in #1028
Added the ERM Identifier Database as provider by @egonw in #1029
Hide RDFLib import in togoid by @cthoyt in #1030
Fix Integbio downloader by @cthoyt in #1031
Fix new prefix action code, add missing publications key by @bgyori in #1033
Add SID as synonym for pubchem.substance by @cthoyt in #1036
Improve redirection by @cthoyt in #1037
Add prefix: hgvs by @cthoyt in #1035
Fix UniProt alignment by @cthoyt in #1038
Update mass spec records by @cthoyt in #1040
Mark three Bgee resources as deprecated by @cthoyt in #1041
Add WB uppercase prefix to bioregistry by @matentzn in #1042
Add prefix: mavedb by @github-actions in #1046
Add missing pandas dependency for alignment by @cthoyt in #1047
Update IDO pattern by @cthoyt in #1049
Add NCBITaxon contact by @cthoyt in #1055
New prefix: biocompute by @cthoyt in #1053
Add prefix: OncoMX by @cthoyt in #1054
Proactively update Prefix.cc by @cthoyt in #1056
Add prefix: osti by @github-actions in #1051
Fix Pydantic models for health report by @cthoyt in #1057
Add license for ORDO and update OBO Foundry patterns/examples by @cthoyt in #1059
Prepare training materials for monday by @cthoyt in #1060
Add new providers and logo to MeSH by @rombaum in #1066
Update contributors page by @cthoyt in #1069
Add stylization of MeSH prefix to OBO Foundry Community Context by @kevinschaper in #1062
Remove incorrect mapping for ICDO by @cthoyt in #1071
Update URL for Cellosaurus OBO file by @cthoyt in #1072
Add contact and publications for GARD by @cthoyt in #1073
Add UMLS resource licenses by @cthoyt in #1068
Add URI parsing endpoint by @cthoyt in #1070
Update reference handling by @cthoyt in #1076
License curations for gene resources by @cthoyt in #1078
Add documentation about PURLs by @cthoyt in #1080
More curations by @cthoyt in #1081
Fix broken links by @cthoyt in #1082
Add nztcs record with wikidata mapping by @cthoyt in #1083
Don't display Twitter handles by @cthoyt in #1088
Improve Pydantic handling of private attribute by @cthoyt in #1089
Add new provider to Reactome record for Pathway Viewer by @github-actions in #1086
Add lowercase preferred prefix for semweb resources, update rdf example by @bgyori in #1091
Update GO providers and enable overriding Identifiers.org by @cthoyt in #1093
Improve provider section of resource page on web app by @cthoyt in #1094
Improve contribution docs by @cthoyt in #1097
Reorganize repository structure by @cthoyt in #1103
Change update schedule to weekly by @cthoyt in #1101
Add new contact people by @cthoyt in #1102