Improve upgrades system, add tests

[remram44]

This branch has more contrived tests for the upgrades system. Most don't pass.

• test_upgrade1: This upgrades from version 0.2 to 0.4. There is no explicit upgrade to 0.4 to 0.5, but an automatic upgrade would succeed; however it is not attempted.
• test_upgrade2: This chains two upgrades, with no ambiguity.
• test_upgrade3: Here there are multiple possible upgrade from 0.2: either to 0.3 (then 0.5), or directly to 0.5. The upgrade to 0.3 is preferred, this is wrong.
• test_upgrade4: Here several automatic upgrade would be needed. Module is 0.0, would need to get to 0.1 to upgrade to 0.2, then auto to 0.3 to upgrade to 0.4, then auto to 0.5.

I'm not entirely sure what can be done and what we want to support (specially in terms of automatic upgrades). Discussion is probably needed here.

This doesn't yet cover the problem @rexissimus ran into on VTK functions, #1047. It might be a different issue fixable separately.
#1017 can probably fixed without handling all of this, although the upgrades won't be as robust.

[remram44]

Also, the remapping functions (passed as function_remap, src_port_remap, etc) don't get the controller, which leads to weird workarounds like the global _controller in vtk's upgrade code. But I don't know if we can change this without breaking compatibility (maybe pass it for new-style upgrades, UpgradeModuleRemap objects, and not for old ones, dict?)