Prototype for decomposition of transcript or gene sequences and extraction of their specific k-mers

Scripts and data for the CCLE Transipedia publication

KmerExploR provides information of a requested RNA-seq dataset Set.

companon tools for Transipedia website and Reindeer.

Sample reads from fastq files - align to genome - makes a "meta-bam" file.

Generalized contig annotation (dekupl-annot 2.0 in python)

A simple Python script for scanning a kmer count matrix and select lines with desired statistics