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@Swart-lab

Swart lab

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  1. bleties bleties Public

    IES retention analysis from PacBio CCS reads

    Python 4 2

  2. Intronarrator Intronarrator Public

    Gene prediction using empirically determined introns

    Python 2

  3. pogigwasc pogigwasc Public

    Prediction of genes in genomes with ambiguous stop codons

    Java 1

Repositories

Showing 10 of 28 repositories
  • loxodes-bleties-workflow Public
    Swart-lab/loxodes-bleties-workflow’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated May 6, 2024
  • loxodes-assembly-workflow Public
    Swart-lab/loxodes-assembly-workflow’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 10, 2023
  • pogigwasc-utils Public
    Swart-lab/pogigwasc-utils’s past year of commit activity
    Python 0 MIT 0 1 0 Updated Nov 10, 2023
  • eugene Public Forked from tschiex/eugene

    Eugene is an integrative genome annotation software

    Swart-lab/eugene’s past year of commit activity
    C++ 0 1 0 0 Updated Oct 30, 2023
  • trf_utils Public

    Scripts to reformat TRF output files

    Swart-lab/trf_utils’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 25, 2023
  • loxodes-srna-workflow Public

    small RNA library processing and analysis

    Swart-lab/loxodes-srna-workflow’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 25, 2023
  • loxodes-pogigwasc-workflow Public

    Pogigwasc gene prediction of Loxodes magnus genome

    Swart-lab/loxodes-pogigwasc-workflow’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 25, 2023
  • loxodes-nucleosomes-workflow Public
    Swart-lab/loxodes-nucleosomes-workflow’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 25, 2023
  • loxodes-kmer-comp Public
    Swart-lab/loxodes-kmer-comp’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 25, 2023
  • loxodes-intronarrator-workflow Public

    Empirical intron annotation for Loxodes magnus genome assembly

    Swart-lab/loxodes-intronarrator-workflow’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 25, 2023
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