Sitecore deployment doesn't clean WebRoot on publish #18
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With the new ARM scripts which adds the CompatibilityLevel fixes, the sites are deployed only using addOnPackages. This doesn't trigger a cleanup of the siteroot on publish. To fix this an empty webapp should be added to the deployment in the root. In the added pull-request only support is added to the 8.2.5 XP0 and XP deployments but should be added to all deployments using the correct url to Empty.scwdp.zip.
More information about the addOnPackage deployment can be found here:
https://stackoverflow.com/questions/45868692/deploying-to-an-azure-web-app-via-arm-msdeploy-without-deleting-existing-files