Computational Biology @Pacific Northwest National Laboratory
This site is for repositories for computational biology work performed at the Pacific Northwest National Laboratory, a Department of Energy National Laboratory.
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- Richland, WA
- https://www.pnnl.gov/computational-biology
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decomprolute
decomprolute PublicA suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.
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Repositories
Showing 10 of 84 repositories
- BoltzmannMFX Public
BoltzmannMFX is a biological simulation code that solves chemical reaction networks using maximum entropy methods. It uses modules from MFiX-Exa and is based on the AMReX framework for massively parallel block-structured adaptive mesh applications.
PNNL-CompBio/BoltzmannMFX’s past year of commit activity - CLEAN-Contact Public
PyTorch Implementation of CLEAN-Contact: Contrastive Learning-enabled Enzyme Functional Annotation Prediction with Structural Inference
PNNL-CompBio/CLEAN-Contact’s past year of commit activity - SElon7942-GEM Public
PNNL-CompBio/SElon7942-GEM’s past year of commit activity - SERGIO Public Forked from PayamDiba/SERGIO
A simulator for single-cell expression data guided by gene regulatory networks
PNNL-CompBio/SERGIO’s past year of commit activity - srpAnalytics Public
This repository contains the code necessary to process any new data for the Superfund Research Program Analytics Portal.
PNNL-CompBio/srpAnalytics’s past year of commit activity - ProchlorococcusGEM Public
PNNL-CompBio/ProchlorococcusGEM’s past year of commit activity - cNFOrganoidAnalysis Public
PNNL-CompBio/cNFOrganoidAnalysis’s past year of commit activity
