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144 Open 1,634 Closed
144 Open 1,634 Closed
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Issues list

When I use nnUNet for inference, it gets stuck at a certain step and cannot proceed. Changing the device doesn't help, and there are no error messages.
#2211 opened May 21, 2024 by lizflora
@saikat-roy
Debug nnunet
#2209 opened May 21, 2024 by dream-mjq
@mrokuss
2
How to run inference with pretrained models nnUNetv2? nnUNetv3?
#2208 opened May 21, 2024 by ptlzon
@mrokuss
Environment file is needed
#2203 opened May 19, 2024 by vigor-jzhang
@Lars-Kraemer
1
Are the other backbones in the paper ”nnU-Net Revisited: A Call for Rigorous Validation in 3D Medical Image Segmentation“, such as implementation of STU-Net or SwinUNETRv2 in nnUNet will be available?
#2202 opened May 19, 2024 by VdaylightV
@ykirchhoff
1
BRATS2020 conversion script
#2201 opened May 19, 2024 by ulfathussainulfat
@Kobalt93
Why is my dice coefficient constantly oscillating around 0 or 0.0x?
#2200 opened May 19, 2024 by yibeizixia
@sten2lu
4
Decision on setting up hyperparameter tuning.
#2198 opened May 17, 2024 by aymuos15
@GregorKoehler
Issue when I try to use nnUNet to other model
#2197 opened May 17, 2024 by chenzhang9476
@FabianIsensee
Error in running the command nnUNetv2_train: cannot access local variable 'region_labels' where it is not associated with a value
#2196 opened May 16, 2024 by sinaziaee
@GregorKoehler
Error occurred when following pretraining_and_finetuning tutorial
#2195 opened May 16, 2024 by yy042
@seziegler
3
Longitudinal option / ideas for nnUNet?
#2194 opened May 16, 2024 by karllandheer
@TaWald
Inference doesn't work on CPU
#2193 opened May 16, 2024 by davidkflau
@ykirchhoff
3
Using nnUNet V1 to infer the predicted results, it does not work in the final step
#2192 opened May 15, 2024 by angleboy8
@Kobalt93
Evaluation metric
#2191 opened May 15, 2024 by Merom99
@FabianIsensee
2
Performance metrics questions
#2189 opened May 15, 2024 by Peaceandmaths
@ykirchhoff
5
Any way to deal with this?
#2188 opened May 15, 2024 by aymuos15
@FabianIsensee
2
Question regarding multichannel names
#2187 opened May 15, 2024 by unrpi18
@TaWald
Predicting next stage 3d_cascade_fullres failed for case 0011 because the preprocessed file is missing! Run the preprocessing for this configuration first!
#2186 opened May 15, 2024 by chenney0830
@Kobalt93
How to use LibTorch c++ api to do predict from source files
#2185 opened May 15, 2024 by venividivici666
@sten2lu
2
Issue exporting trained nnUNet model
#2184 opened May 15, 2024 by skim2257
@constantinulrich
1
3d_lowres Inference RuntimeError: Some background workers are no longer alive
#2182 opened May 14, 2024 by chenney0830
@Lars-Kraemer
local variable 'region_labels' referenced before assignment
#2181 opened May 14, 2024 by IEbokai
@Lars-Kraemer
1
Training error due to killed background workers
#2180 opened May 13, 2024 by jonathanjlau-hku
@Lars-Kraemer
2
On the issue that modifying num_epochs in the nnUNetTrainer.py does not work
#2179 opened May 12, 2024 by iWangTing
@ykirchhoff
4
ProTip! Follow long discussions with comments:>50.