This repository has been archived by the owner on Feb 6, 2024. It is now read-only.
This version integrate the latest LSD2 version 1.8 that fixes a few issues. Moreover, the outgroup will now be kept in the time tree by default.
Bugfixes:
- Crash with -bnni option and GHOST model (reported by Miles Zhang and thanks Diep).
- Crash with --sampling option for -bnni and -b (standard bootstrap) (thanks Diep).
--symtest: use the normalised divergence (reported by Peter Foster).- Binary mixture models do not work as specified (reported by Edward Braun).
- Fix issue #145 in LSD2, update lsd v1.8.1.
New features:
- New protein model FLAVI.