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Merging multiple graph files #4289
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Thanks! Error [vg deconstruct]: No specified reference path or prefix found in graph My code: vg version v1.40.0 "Suardi" The format of chromosome name is TW_t2#1#chr1, TW_t2#1#chr2 ... TW_t2#1#chr14 |
I am also trying to combine graphs, but I have full graphs (containing all chromosomes) that I have augmented to contain variants specific to different individuals. Can |
@Lucio-Yang You can try I would recommend upgrading to a more recent release of vg, and also maybe adding an I know @glennhickey is revising deconstruct; I'm not sure whether it will help with your particular problem. @ashleethomson unfortunately |
Hi!
I have constructed the multiple graphs and i want to combine that to a single graph file. But I found that both
vg combine
andvg ids
can combine multiple vg files, and the output size is different. Which one should I use and what is the difference ?Thank you very much!
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