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PyVOL installation issues #11

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RashedCh opened this issue Jul 19, 2022 · 4 comments
Open

PyVOL installation issues #11

RashedCh opened this issue Jul 19, 2022 · 4 comments

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@RashedCh
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Windows 11 Pro
Python 3.10.5
pip 22.1.2 from C:\Python\lib\site-packages\pip (python 3.10)
PyMOL 2.5.2 (Licensed)

I've got the following error message while installing PyVOL :

Traceback (most recent call last):
File "C:\PyMOL\lib\site-packages\pmg_tk\startup\pyvol-installer_init_.py", line 68, in pyvol_window
refresh_installation_status(form)
File "C:\PyMOL\lib\site-packages\pmg_tk\startup\pyvol-installer_init_.py", line 260, in refresh_installation_status
all_pckgs = subprocess.check_output([sys.executable, "-m", "pip", "list", "--format=json"]).decode('utf-8').strip()
File "C:\PyMOL\lib\subprocess.py", line 411, in check_output
**kwargs).stdout
File "C:\PyMOL\lib\subprocess.py", line 512, in run
output=stdout, stderr=stderr)
subprocess.CalledProcessError: Command '['C:\PyMOL\pythonw.exe', '-m', 'pip', 'list', '--format=json']' returned non-zero exit status 120.

@gorostiolam
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I get the same error albeit not while installing PyVOL but while trying to launch it from the Pymol Plugin tab.

I installed PyVOL from the .zip GUI installer via the Plugin Manager on Pymol.

I have Pymol 2.5.2 with an educational license in Windows 10
Python 3.7.10
pip 21.2.4

Also, MSMS is installed and added to Path in Windows.

@swanss
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swanss commented Oct 11, 2022

I'm seeing the same error when attempting to install PyVol

@jedgold
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jedgold commented Dec 1, 2022

Just to pile on: I have the same error, using incentive PyMol (same as gorostiolam)

@tjmier
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tjmier commented Dec 19, 2022

I am also having the same issue when attempting to launch the plugin
Win10
pymol 2.5.4
python 3.11
installed via plugin manager using "https://github.com/schlessinger-lab/pyvol/blob/master/installers/pyvol-installer.zip"
Capture

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5 participants