{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"crispr-process-nf","owner":"ZuberLab","isFork":false,"description":"Process CRISPR and shRNA functional genetic screening data","allTopics":["bioinformatics","nextflow","singularity","crispr-cas9","shrna"],"primaryLanguage":{"name":"Nextflow","color":"#3ac486"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-03T11:34:42.759Z"}},{"type":"Public","name":"crispr-mageck-nf","owner":"ZuberLab","isFork":false,"description":"Analyze CRISPR and shRNA functional genetic screening data","allTopics":["bioinformatics","nextflow","singularity","crispr-cas9","shrna"],"primaryLanguage":{"name":"Nextflow","color":"#3ac486"},"pullRequestCount":0,"issueCount":0,"starsCount":7,"forksCount":5,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-03T11:33:22.350Z"}},{"type":"Public","name":"dual-crispr-process-nf","owner":"ZuberLab","isFork":false,"description":"Process dual-sgRNA CRISPR functional genetic screening data.","allTopics":[],"primaryLanguage":{"name":"Nextflow","color":"#3ac486"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-22T08:53:34.491Z"}},{"type":"Public","name":"Containers","owner":"ZuberLab","isFork":false,"description":"Repository of Makefiles for Docker containers","allTopics":[],"primaryLanguage":{"name":"Dockerfile","color":"#384d54"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"GNU Affero General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-04-13T18:11:31.953Z"}},{"type":"Public","name":"crisprepo-shiny","owner":"ZuberLab","isFork":false,"description":"Shiny frontend for browsing screening data","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"GNU Affero General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-07-06T14:36:28.987Z"}},{"type":"Public","name":"vbcf-nf","owner":"ZuberLab","isFork":false,"description":"Retrieve Files from VBCF Sequencing Facility","allTopics":["nextflow","bioinformatics-pipeline"],"primaryLanguage":{"name":"Nextflow","color":"#3ac486"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-04-26T14:24:38.590Z"}},{"type":"Public","name":"crispr-nf","owner":"ZuberLab","isFork":false,"description":"Pre-processing of multiplexed CRISPR / shRNA Screens (deprecated)","allTopics":["nextflow","bioinformatics-pipeline","crispr-analysis"],"primaryLanguage":{"name":"Nextflow","color":"#3ac486"},"pullRequestCount":0,"issueCount":1,"starsCount":2,"forksCount":2,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-04-23T08:09:32.961Z"}},{"type":"Public","name":"mageck-nf","owner":"ZuberLab","isFork":false,"description":"Statistical Analysis of multiplexed CRISPR / shRNA Screens using MAGeCK (deprecated)","allTopics":["docker","singularity","bioinformatics-pipeline","crispr-analysis","mageck","nextflow"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-04-23T08:08:54.083Z"}},{"type":"Public","name":"guidemapper-nf","owner":"ZuberLab","isFork":false,"description":"Annotate CRISPR and shRNA screening libraries","allTopics":["nextflow","singularity","bioinformatics-pipeline","crispr"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-04-11T12:13:31.237Z"}},{"type":"Public","name":"sra-nf","owner":"ZuberLab","isFork":false,"description":"Download Raw Reads from SRA Archive","allTopics":["nextflow","bioinformatics-pipeline","sratoolkit"],"primaryLanguage":{"name":"Nextflow","color":"#3ac486"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-02-08T15:40:32.690Z"}},{"type":"Public","name":"palantir-shiny","owner":"ZuberLab","isFork":false,"description":"Shiny frontend for browsing and gene expression and screening data","allTopics":["docker-image","screening","shiny-apps","rna-seq-analysis"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":"GNU Affero General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-12-29T16:24:57.787Z"}}],"repositoryCount":11,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}