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Don't count nucleotides 0-100 towards divergence #40

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corneliusroemer opened this issue Mar 19, 2023 · 0 comments
Open

Don't count nucleotides 0-100 towards divergence #40

corneliusroemer opened this issue Mar 19, 2023 · 0 comments

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@corneliusroemer
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44 is very flip-floppy due to being often not properly sequenced.

We should not show it in calculation of divergence to avoid flip flops from lengthening the tree

Nextclade distance calculation should exempt 0-100 from distance calculations as well, but that's a different feature (requires an addition to virus_properties.json though - masked sites for placement)

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