-
Notifications
You must be signed in to change notification settings - Fork 12
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Segmentation fault when using --lowest species #28
Comments
Interestingly, everything works if I use |
Hi Donovan! I'm not sure where bad taxonomy data could cause a segfault. Invalid taxon ids should be ignored by MetaCache. Does this error happen only with abundance output? |
Can I send you the data that is causing the bug? It is ~100 GB, but I can upload it to a FTP site if you can make one available. |
Hi,
I've run into an issue where MetaCache runs as expected using the following parameters, but crashes with "Command terminated by signal 11" when the
--lowest species
flag is added:Is there a set of incompatible flags I'm using or is it possible that using the -lowest flag has uncovered a bug?
Thanks,
Donovan
The text was updated successfully, but these errors were encountered: