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KeyError contig_4488 #42
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Hi @ZarulHanifah, Sorry about the delay in getting back to you. Were you able to sort out this error? Thanks, |
I havent been able to sort this out. I'm preparing a GDrive link with the relevant files... |
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Hello Vini,
I got a have been using MetaCoAG for a while, works well most of the time until I got a
KeyError: contig_4488
. The dataset Ive been working on is ONT, assembled on metaFlye.This contig_4488 is not present in my flye assembly. An edge_4488 was present in the graph assembly though (Could this be the issue?).
As you can see, "contig_4488" is supposedly not present in any of the input files given to MetaCoAG.
The command executed:
Here is the error message:
Thank you 🙏
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