{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":515039720,"defaultBranch":"master","name":"sage","ownerLogin":"lazear","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-07-18T04:55:55.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/14057244?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1710462577.0","currentOid":""},"activityList":{"items":[{"before":"9e870429889b341c4773df32b65e553283301a93","after":"a969ca701e8955d1d2dabd1706c2339d7f65d307","ref":"refs/heads/master","pushedAt":"2024-05-01T01:34:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"fix: don't deisotope reporter ion region if MS2-TMT is used (#82)","shortMessageHtmlLink":"fix: don't deisotope reporter ion region if MS2-TMT is used (#82)"}},{"before":"033e24bfca72069cef82ccf453338d93ee616ae9","after":"9e870429889b341c4773df32b65e553283301a93","ref":"refs/heads/master","pushedAt":"2024-04-15T15:12:07.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"Update timsrust; use spectrum index instead of precursor index as spectrum id","shortMessageHtmlLink":"Update timsrust; use spectrum index instead of precursor index as spe…"}},{"before":"b8ec014772bc341332e75d39899d88eb49d1d485","after":"033e24bfca72069cef82ccf453338d93ee616ae9","ref":"refs/heads/master","pushedAt":"2024-03-15T00:29:37.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"chore: release v0.14.7","shortMessageHtmlLink":"chore: release v0.14.7"}},{"before":"bc8bf85d402265341fad941dbb93df9437a5b855","after":"b8ec014772bc341332e75d39899d88eb49d1d485","ref":"refs/heads/master","pushedAt":"2024-03-08T03:44:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"chore: update deps","shortMessageHtmlLink":"chore: update deps"}},{"before":"6969283b0d6dda3054e554a1b9d9e0ad8627f11e","after":"bc8bf85d402265341fad941dbb93df9437a5b855","ref":"refs/heads/master","pushedAt":"2024-03-08T03:22:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"fix: add missing parquet columns (#118)","shortMessageHtmlLink":"fix: add missing parquet columns (#118)"}},{"before":"0cc7ca4014ef2b6f27a60b4a1766f6187d689d13","after":"6969283b0d6dda3054e554a1b9d9e0ad8627f11e","ref":"refs/heads/master","pushedAt":"2024-02-07T05:13:40.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"added test","shortMessageHtmlLink":"added test"}},{"before":"a7414c8bcf608c5b5ff5271c08d1f5d87d72c23b","after":"0cc7ca4014ef2b6f27a60b4a1766f6187d689d13","ref":"refs/heads/master","pushedAt":"2024-02-03T19:07:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"chore: release v0.14.6\n\n- add ion mobility to parquet outputs\n- update changelog\n- cargo fmt","shortMessageHtmlLink":"chore: release v0.14.6"}},{"before":"d1a06c333254a537c2fd3ae06af9f75a297e3666","after":"a7414c8bcf608c5b5ff5271c08d1f5d87d72c23b","ref":"refs/heads/master","pushedAt":"2024-02-03T18:42:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"feat: ion mobility model\n\nadded mobility to outputs and model details\n\nsimplified model\n\nremoved redundant logging\n\nchanged feature engineering\n\nremoved old comments\n\nremoved resolved comment","shortMessageHtmlLink":"feat: ion mobility model"}},{"before":"8e961094520efeef31d2a5883538a12d5f5e0970","after":"d1a06c333254a537c2fd3ae06af9f75a297e3666","ref":"refs/heads/master","pushedAt":"2024-01-04T16:24:10.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"Fix link to Picked group FDR in README.md","shortMessageHtmlLink":"Fix link to Picked group FDR in README.md"}},{"before":"fe437506c3cd429ee62ad635668ec5c01b884026","after":"8e961094520efeef31d2a5883538a12d5f5e0970","ref":"refs/heads/master","pushedAt":"2024-01-03T05:27:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"chore: lints, formatting, touch up mgf charge regex","shortMessageHtmlLink":"chore: lints, formatting, touch up mgf charge regex"}},{"before":"181df247bbf7e99379dddd2817b7c0ace42e1c39","after":"fe437506c3cd429ee62ad635668ec5c01b884026","ref":"refs/heads/master","pushedAt":"2024-01-03T04:57:55.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"feat: add MGF reader","shortMessageHtmlLink":"feat: add MGF reader"}},{"before":"f13f1bc64f7241bd28795aede17a9f2e9fc45b62","after":"181df247bbf7e99379dddd2817b7c0ace42e1c39","ref":"refs/heads/master","pushedAt":"2023-12-06T00:17:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"fa7e96f4a536e17b8366a24c0df74bdff3d1fea0","after":"f13f1bc64f7241bd28795aede17a9f2e9fc45b62","ref":"refs/heads/master","pushedAt":"2023-11-30T01:47:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"chore: release v0.14.5","shortMessageHtmlLink":"chore: release v0.14.5"}},{"before":"6f72b993f0a7fe8a865da768cc1cac849d1e23f0","after":"fa7e96f4a536e17b8366a24c0df74bdff3d1fea0","ref":"refs/heads/master","pushedAt":"2023-11-30T01:43:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"feat: send some basic telemetry data\n\n- Record # of CPU cores, memory, fragment database size, which features\n are turned on\n- No identifications, quantitification, or identifiable data is tracked\n- See CHANGELOG for more details","shortMessageHtmlLink":"feat: send some basic telemetry data"}},{"before":"e18acaecdf73d361b06239b316d05cb09fad3866","after":"6f72b993f0a7fe8a865da768cc1cac849d1e23f0","ref":"refs/heads/master","pushedAt":"2023-11-29T23:45:34.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"fix: correct CSV headers","shortMessageHtmlLink":"fix: correct CSV headers"}},{"before":"e16f835131204dfb5040e2342739b86b7b60edef","after":"e18acaecdf73d361b06239b316d05cb09fad3866","ref":"refs/heads/master","pushedAt":"2023-11-29T23:36:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"fix: remove useless ms1_intensity field from output (#102)","shortMessageHtmlLink":"fix: remove useless ms1_intensity field from output (#102)"}},{"before":"e4293a6075c9a7465879b1d4a11c4d094fefcd86","after":"e16f835131204dfb5040e2342739b86b7b60edef","ref":"refs/heads/master","pushedAt":"2023-11-29T23:32:12.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"fix: make psm_id required field, add to all outputs, change ordinal\n\n- fix: int32 -> int64 for psm_id in parquet","shortMessageHtmlLink":"fix: make psm_id required field, add to all outputs, change ordinal"}},{"before":"7abbb08ba2e42acd1ae5e5d853a3bfee6cdf8b0d","after":"e4293a6075c9a7465879b1d4a11c4d094fefcd86","ref":"refs/heads/master","pushedAt":"2023-11-22T18:28:35.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"feat: modified visibility, clone for pysage connector","shortMessageHtmlLink":"feat: modified visibility, clone for pysage connector"}},{"before":"e35357de2981a61fd92110cf0e894eef8ca29919","after":"7abbb08ba2e42acd1ae5e5d853a3bfee6cdf8b0d","ref":"refs/heads/master","pushedAt":"2023-11-03T04:52:53.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"feat: support for semi-enzymatic digests (#92)\n\n- propagate semi_enzymatic through to output\n- add \"database.enzyme.semi_enzymatic\" parameter, property-based tests for missed cleavages","shortMessageHtmlLink":"feat: support for semi-enzymatic digests (#92)"}},{"before":"62c9ca5276fc5428fc29909c7486a04145f3d173","after":null,"ref":"refs/heads/semi","pushedAt":"2023-11-03T04:31:24.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"}},{"before":null,"after":"62c9ca5276fc5428fc29909c7486a04145f3d173","ref":"refs/heads/semi","pushedAt":"2023-11-03T04:30:37.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"add parameter, property-based tests for missed cleavages","shortMessageHtmlLink":"add parameter, property-based tests for missed cleavages"}},{"before":"21b0928e16034e7216439a1552b054a6dd6bae62","after":"e35357de2981a61fd92110cf0e894eef8ca29919","ref":"refs/heads/master","pushedAt":"2023-10-26T02:20:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"Release v0.14.4","shortMessageHtmlLink":"Release v0.14.4"}},{"before":"5e7a498781d8b12c40d103288e3e38613cc954a7","after":"21b0928e16034e7216439a1552b054a6dd6bae62","ref":"refs/heads/master","pushedAt":"2023-10-19T17:22:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"feat: initial timsrust support\n\nFEAT: Addition of tdf module to sage cloudpath\n\nFEAT: adding read_tdf option to cloudpath utils\n\nFEAT: Adding tdf reader to sage-cli main if extension is bruker\n\nCHORE: changed timsrust repo to crates instead of github\n\nCHORE: cargo fmt updates\n\nFIX: error message propagation of tdf reading in main and cargo fmt\n\nCHORE: update timsrust to 0.1.7\n\nFEAT: improve RAM performance by consuming timsrust spectra directly\n\nCHORE: updated to timsrust020\n\nFIX: cargo lock","shortMessageHtmlLink":"feat: initial timsrust support"}},{"before":"4710b9730c898ed5f0563fbd93e8c27b219b34cd","after":"5e7a498781d8b12c40d103288e3e38613cc954a7","ref":"refs/heads/master","pushedAt":"2023-10-17T20:56:51.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"fix: typo in paper url","shortMessageHtmlLink":"fix: typo in paper url"}},{"before":"c3f1324a7bb1dfd73e5ea9dcca7a6aec69dae6ea","after":"4710b9730c898ed5f0563fbd93e8c27b219b34cd","ref":"refs/heads/master","pushedAt":"2023-10-16T18:57:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"chore: add citation info","shortMessageHtmlLink":"chore: add citation info"}},{"before":"9e8449aa3763f12f4cd4e4d934eabe11bd53f37f","after":"c3f1324a7bb1dfd73e5ea9dcca7a6aec69dae6ea","ref":"refs/heads/master","pushedAt":"2023-10-16T18:17:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"fix: search precursors with z=1 (#95)","shortMessageHtmlLink":"fix: search precursors with z=1 (#95)"}},{"before":"3f072df3d91a33b54731ab067796610bdbb134c5","after":"9e8449aa3763f12f4cd4e4d934eabe11bd53f37f","ref":"refs/heads/master","pushedAt":"2023-09-26T17:47:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"bump to v0.14.3 hotfix","shortMessageHtmlLink":"bump to v0.14.3 hotfix"}},{"before":"d006109987b4a2190a93c59c295727bc92526e53","after":"3f072df3d91a33b54731ab067796610bdbb134c5","ref":"refs/heads/master","pushedAt":"2023-09-26T17:22:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"fix: bug in writing charge states to lfq.parquet","shortMessageHtmlLink":"fix: bug in writing charge states to lfq.parquet"}},{"before":"2c580c1b9a36ef1a1dfc5048af793092979a15fb","after":"d006109987b4a2190a93c59c295727bc92526e53","ref":"refs/heads/master","pushedAt":"2023-09-26T16:04:43.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"},"commit":{"message":"fix: wrong version in changelog","shortMessageHtmlLink":"fix: wrong version in changelog"}},{"before":"6382bb2d32f953f1397cad29701268f9000b9fcb","after":null,"ref":"refs/heads/version","pushedAt":"2023-09-26T16:02:33.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"lazear","name":"Michael Lazear","path":"/lazear","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/14057244?s=80&v=4"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEPo32jQA","startCursor":null,"endCursor":null}},"title":"Activity · lazear/sage"}